Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796616.1_cds_XP_016450514.1_4427
CDS Infomation

[gene=LOC107775287] [db_xref=GeneID:107775287] [protein=lysine--tRNA ligase-like] [protein_id=XP_016450514.1] [location=complement(join(14718..14753,14873..15016,15185..15253,15373..15516,15665..15821,15922..16018,16105..16387,16484..16609,16780..16857,16953..17065,17283..17368,17598..17691,17767..17932,18064..18093))] [gbkey=CDS]
Sequence

ATGTCCGAGAGTGAGAGTTTGGATCCTACACAATATCGGGCTAACAGGTTGAAGAGCCTT
GAAACGATGAGAGAATCCGGAATAAATCCGTATTCAGAAGCACCTCGCAACATAATCTCT
ATCCGTCAATTTATCAGCAAGTATGCTTATTTAAGTGCCGGAGAGAAACTTGAGGCCATT
GAAATCTCCTTAGCAGGGAGAGTAATTACGAAGCGAGCATCATCGTCAAAGCTCTATTTC
TATGAACTGCTTGATGACGGGGCAAGAGTACAAGTAATGGCCGATGCAAGGGATTCAGAT
ATGGATACTGTTGCATTTTCTACCTATCACTCTGGAGTGAAGCGAGGCGACATCATTGCT
ATCTGTGGATATCCTGGGAAGAGTAAGAGAGGAGAGCTAAGTATCTTTCCAAGATCTTTG
GAAGTGAAAGCCCCTTGCCTACACATGCTACCAAGGCATTTGGCTGTCGTAGATGGAACT
CGGACACAGAGTTCCCAAGGAACAACTAACGGTACTTGGACTCCAGGAGATGCAAGAAAT
CCTGCCTCATATGTGTTAACTGACCAGGAAACTCGGTATCGTCAAAGGTACTTAGACCTG
ATGATAAATCCAGAAGTTCAAACTGTATTCAGGACTCGCACCAGAATCACTAAATACATC
AAGCGTTTCCTTGATGATCTTGAGTTTCTGGAGGTGGAGACTCCTAATATGAATTTGACT
GCTGGAGGAGCTTCCGCGAAACCATTTACTACTTACTATAATGAGTTGGACACAAACGTA
CACATGCGTGTTTCCCCTGAACTTTATCTTAAGATGTTGGTTGTTGGTGGATTTAATCGT
GTTTATGAGATCGGGAAGGTATTCAGGAATGAGGGAATGGATCAAACTCATTGTCCTGAA
TTCACAATGTGTGAATTTTATATGGCTTATGCTGATTACAATGATTTGATGGATTTGACA
GAGCAGCTATTATCAGGTATGGTGAAGGAACTAACCGGAAGCCATAAAATAAGGTATCAT
GCTAATGGCTTGGATAATGAACCAATAGAAATTGACTTCACTCCTCCATTCAGAAAGATT
GATATTCTGTCAGAGTTGGAGAGAGTGGCTAACATCAGTATACCTAGAGATCTTTCAAAG
GAAGCTGCTAATAAGTACTTGCTAGATGTATGTGAAAAGTTTGATGTCAAGTGTCCTCCA
CCTCATACCACAACACGATTGCTCGATAAGCTAGTTGGACATTTTATTGAAGTAAGCTGC
ATAAATCCCACTTTTATTATCAACCATCCTGAGATCATGAGTCCACTGGCAAAATCGCAC
AGATCAGAGCCTGGTTTGACTGAGCGTTTCAACTTATTTGTTAACAGGATAGAGCTATGC
GATGCCTATACTGAACTAAATGATCCTGTAGAACAGAGACGACGTTTCACTGAGCAATTA
AAGGATCGAACATCAGGAGACGACGAGGCAATGGTTTTGGATGAATCCTACATTACTGCT
TTAGAGTATGGATTACCCCCTACTGCTGGATTTGGCATGGGAATTGATAGACTTACAATG
TTGCTAACAGATTCACAAAATGTCAAAGAAGCAATCCTCTTTCCACCCATGAGACCACAG
TAA

Peptide Sequence

PEP ID

XP_016450514.1
PEP Infomation

PREDICTED: lysine--tRNA ligase-like [Nicotiana tabacum]
Sequence

MSESESLDPTQYRANRLKSLETMRESGINPYSEAPRNIISIRQFISKYAYLSAGEKLEAI
EISLAGRVITKRASSSKLYFYELLDDGARVQVMADARDSDMDTVAFSTYHSGVKRGDIIA
ICGYPGKSKRGELSIFPRSLEVKAPCLHMLPRHLAVVDGTRTQSSQGTTNGTWTPGDARN
PASYVLTDQETRYRQRYLDLMINPEVQTVFRTRTRITKYIKRFLDDLEFLEVETPNMNLT
AGGASAKPFTTYYNELDTNVHMRVSPELYLKMLVVGGFNRVYEIGKVFRNEGMDQTHCPE
FTMCEFYMAYADYNDLMDLTEQLLSGMVKELTGSHKIRYHANGLDNEPIEIDFTPPFRKI
DILSELERVANISIPRDLSKEAANKYLLDVCEKFDVKCPPPHTTTRLLDKLVGHFIEVSC
INPTFIINHPEIMSPLAKSHRSEPGLTERFNLFVNRIELCDAYTELNDPVEQRRRFTEQL
KDRTSGDDEAMVLDESYITALEYGLPPTAGFGMGIDRLTMLLTDSQNVKEAILFPPMRPQ

Transcript Sequence

Gene sequence data has not been registered.